Category Archives: Uncategorized

Back to blogging?

This blog’s been on hold while I prepared for and (successfully) went through the tenure process. I’d like to start posting again, and I’m shocked that the break has been almost six years..

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Mistakes by Piketty are OK (even good?)

In an email conversation I tried to make some points about the criticism Piketty has come under for apparently having mistakes in his data. I think the concerns are real but misplaced. Here’s why: There was a point made in … Continue reading

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What the Reinhart & Rogoff Debacle Really Shows: Verifying Empirical Results Needs to be Routine

There’s been an enormous amount of buzz since a study was released this week questioning the methodology in a published paper. The paper under fire is Reinhart and Rogoff’s “Growth in a Time of Debt” and the firing is being … Continue reading

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Getting Beyond Marketing: Scan and Tell

I love this idea: http://nomoresopa.com/wp/. It’s an Android app that allows you to scan a product’s barcode and it will tell you whether the company that makes the product supports the Stop Online Piracy Act. What’s really happening here is … Continue reading

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Disrupt science: But not how you’d think

Two recent articles call for an openness revolution in science: one on GigaOM and the other in the Wall Street Journal. But they’ve got it all wrong. These folks are missing that the process of scientific discovery is not, at … Continue reading

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Don’t expect computer scientists to be on top of every use that’s found for computers, including scientific investigation

Computational scientists need to understand and assert their computational needs, and see that they are met. I just read this excellent interview with Donald Knuth, inventor of TeX and the concept of literate programming, as well as author of the … Continue reading

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Smart disclosure of gov data

Imagine a cell phone database that includes terms of service, prices, fees, rates, different calling plans, quality of services, coverage maps etc. – “smart disclosure,” as the term is being used in federal government circles, means how to make data … Continue reading

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Open Gov and the VA

Peter Levin is CTO of the Dept of Veteran’s Affairs and has a take on open gov tailored to his department: He’s restructuring the IT infrastructure within the VA to facilitate access. For example, the VA just processed their first … Continue reading

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Open Gov Summit: Aneesh Chopra

I’m here at the National Archives attending the Open Government Research and Development Summit, organized by the Office of Science and Technology Policy in the Whitehouse. It’s a series of panel discussions to address questions about the impact and future … Continue reading

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A case study in the need for open data and code: Forensic Bioinformatics

Here’s a vid of Keith Baggerly explaining his famous case study of why we need code and data to be made openly available in computational science: http://videolectures.net/cancerbioinformatics2010_baggerly_irrh. This is some of the discussion that resulted in the termination of clinical … Continue reading

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Chris Wiggins: Science is social

I had the pleasure of watching my friend and professor of applied physics and applied math Chris Wiggins give an excellent short talk at NYC’s social media week at Google. The video is available here: http://livestre.am/BUDx. Chris makes the often … Continue reading

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Ars technica article on reproducibility in science

John Timmer wrote an excellent article called “Keeping computers from ending science’s reproducibility.” I’m quoted in it. Here’s an excellent follow up blog post by Grant Jacobs, “Reproducible Research and computational biology.”

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Post 3: The OSTP’s call for comments regarding Public Access Policies for Science and Technology Funding Agencies Across the Federal Government

The following comments were posted in response to the OSTP’s call as posted here: http://www.ostp.gov/galleries/default-file/RFI%20Final%20for%20FR.pdf. The first wave, comments posted here, asked for feedback on implementation issues. The second wave requested input on Features and Technology (our post is here). … Continue reading

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The OSTP's call for comments regarding Public Access Policies for Science and Technology Funding Agencies Across the Federal Government

The following comments were posted in response to the OSTP’s call as posted here: http://www.ostp.gov/galleries/default-file/RFI%20Final%20for%20FR.pdf: Open access to our body of federally funded research, including not only published papers but also any supporting data and code, is imperative, not just … Continue reading

Posted in Intellectual Property, Law, Open Science, OSTP, Reproducible Research, Scientific Method, Uncategorized | 4 Comments

The Climate Modeling Leak: Code and Data Generating Published Results Must be Open and Facilitate Reproducibility

On November 20 documents including email and code spanning more than a decade were leaked from the Climatic Research Unit (CRU) at East Anglia University in the UK. The Leak Reveals a Failure of Reproducibility of Computational Results It appears … Continue reading

Posted in Law, Open Science, Reproducible Research, Scientific Method, Software, Statistics, Technology, Uncategorized | 7 Comments

Science 2.0: How Tools are Changing Computational Scientific Research

Technology has a history of sweeping scientific enterprise: from Vannevar Bush’s first analog PDE calculators at MIT in the 30’s through the differential analyzers of the 50’s and 60’s to today’s unfinished transition that will end with computation as absolutely … Continue reading

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About

I’m a Postdoctoral Associate in Law and Kauffman Fellow in Law and Innovation at the Information Society Project at Yale Law School. My website is http://www.stodden.net. My research focus is changes to the scientific method arising from the pervasiveness of … Continue reading

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The Scientific Method

OpinionJournal – Peggy Noonan Peggy Noonan laments the inability of the scientific community to come together and deliver a solid answer on global warning. The reason why? The scientists have political agendas: “You would think the world’s greatest scientists could … Continue reading

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Graduate Student Unionization – a dead issue?

In spring quarter of last year I was quoted (without my permission or knowledge, incidentally) in an article on graduate student unionization in the Stanford Daily. http://daily.stanford.edu/tempo?page=content&id=17037&repository=0001_article. It’s not clear to me what the fuss is about, as a TA … Continue reading

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Google Earth – too much of a view?

http://www.worldtribune.com/worldtribune/05/front2453620.076388889.html This article, “Google Earth images compromise secret installations in S. Korea” partly answers my first question when I found out about Google Earth. How are they handling sensitive satellite data? Other countries have objected, out of national security concerns: … Continue reading

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